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SRX26552229: WGS of leaf: two-year-old Camellia Sinensis cv.Tieguanyin_2
1 ILLUMINA (Illumina NovaSeq 6000) run: 64.4M spots, 18.3G bases, 5.8Gb downloads

Design: Total RNA was extracted using the mirVana miRNA Isolation Kit (Ambion) following the manufacturers protocol. RNA integrity was evaluated using the Agilent 2100 Bioanalyzer (Agilent Technologies, Santa Clara, CA, USA). The samples with RNA Integrity Number (RIN) 8 were subjected to the subsequent analysis. The libraries were constructed using TruSeq Stranded Total RNA with Ribo-Zero Gold according to the manufacturers instructions. Then these libraries were sequenced on the Illumina sequencing platform.
Submitted by: Ningde Normal University
Study: Whole transcriptome sequencing analysis reveals the molecular mechanisms of exogenous trehalose in tea plant under heat stress
show Abstracthide Abstract
Tea plants (Camellia sinensis) are a crucial leaf-based economic crop widely cultivated in tropical and subtropical regions of the world. Tea is a healthy non-alcoholic beverage renowned for its rich taste, aroma, flavor, and numerous polyphenolic compounds. However, the challenges posed by global warming, exacerbated by the greenhouse effect, have threatened tea quality and production. Consequently, it is of utmost importance to devise methods to enhance the heat tolerance of tea plants. One such strategy involves seeking an environmentally friendly protective agent to achieve sustainable yield and quality improvements in tea plants. Trehalose is found in diverse organisms and has numerous effects, including its role as an osmolyte, storage reserve, transport sugar, and stress protectant. Additionally, it has been extensively documented that trehalose can modulate plant responses to various biotic and abiotic stresses, such as heat stress. To clarify the specific effect of trehalose on the heat resistance of tea plants, rRNA-depleted RNAseq was used to explore the molecular mechanisms of exogenous trehalose in tea plant under heat stress.
Sample:
SAMN44475544 • SRS23058782 • All experiments • All runs
Library:
Name: CK-0H-2
Instrument: Illumina NovaSeq 6000
Strategy: WGS
Source: TRANSCRIPTOMIC
Selection: PCR
Layout: PAIRED
Runs: 1 run, 64.4M spots, 18.3G bases, 5.8Gb
Run# of Spots# of BasesSizePublished
SRR3116883764,367,90618.3G5.8Gb2024-10-30

ID:
35873784

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